BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024B06SP1|AL428168
(1070 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig886 2019 0.0
>3x_Contig886
Length = 4262
Score = 2019 bits (1013), Expect = 0.0
Identities = 1056/1071 (98%), Gaps = 4/1071 (0%)
Strand = Plus / Plus
Query: 1 gatcagaaaatttccctacaaagagaactgagagagattctcctttccagcttttttggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1345 gatcagaaaatttccctacaaagagaactgagagagattctcctttccagcttttttggg 1404
Query: 61 tagctttttttttgttcgagagaraccactggaacatctcagaaatctacgtacaacgac 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1405 tagctttttttttgttcgagagaaaccactggaacatctcagaaatctacgtacaacgac 1464
Query: 121 gtgtgagaracaaaacgagcaaaataagaaaaaaagcaaactcgtgcaaacaaacataac 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1465 gtgtgagaaacaaaacgagcaaaataagaaaaaaagcaaactcgtgcaaacaaacataac 1524
Query: 181 acgtcaatttgcgtaatttggatcagcccattattcatacaaaaaggcgaagaacgtaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1525 acgtcaatttgcgtaatttggatcagcccattattcatacaaaaaggcgaagaacgtaac 1584
Query: 241 ccacatagaaacccaattgcraccagtgcctttttttttttcaaacgcgcattagcatcc 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1585 ccacatagaaacccaattgcaaccagtgcctttttttttttcaaacgcgcattagcatcc 1644
Query: 301 attcattcattcttaacttttacgaataaacattacatcagataataaagaaaaaaccga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1645 attcattcattcttaacttttacgaataaacattacatcagataataaagaaaaaaccga 1704
Query: 361 ataaaaagtgcattggaaattacgtttcattgtccactcgaccagccatataanatcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1705 ataaaaagtgcattggaaattacgtttcattgtccactcgaccagccatataaaatcaaa 1764
Query: 421 actgatttttagttcgacactcaaagttattttcttggtcaagcgtgtcttattggtacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1765 actgatttttagttcgacactcaaagttattttcttggtcaagcgtgtcttattggtacc 1824
Query: 481 ttctcagctcttgtttctaaggraaagaagctttttttagattttgtacacttttttttt 540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1825 ttctcagctcttgtttctaaggaaaagaagctttttttagattttgtacacttttttttt 1884
Query: 541 tgtcctactacgctttcggacattttctgtctttcttagcttctattgatagcaaaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1885 tgtcctactacgctttcggacattttctgtctttcttagcttctattgatagcaaaaaaa 1944
Query: 601 aaggttcaaatcaaaagtcacggatacaagatataacctagctgacgattactactggcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1945 aaggttcaaatcaaaagtcacggatacaagatataacctagctgacgattactactggcg 2004
Query: 661 aaacactcacaagacagagttttactagttgnt-aarrgttaaacaaaatattagccaca 719
||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||
Sbjct: 2005 aaacactcacaagacagagttttactagttgataaaaggttaaacaaaatattagccaca 2064
Query: 720 cccatagagtttacgcttttcaaactgctcacaccgaaaaacaaaaacccttttcttact 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 cccatagagtttacgcttttcaaactgctcacaccgaaaaacaaaaacccttttcttact 2124
Query: 780 ttactatcttttttttttgattttatttcttcggtttaggtttttccttatttgacagaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2125 ttactatcttttttttttgattttatttcttcggtttaggtttttccttatttgacagaa 2184
Query: 840 aataggcaaaagatatagcaacctacctccgcaaaaaaaggaaaaaggtatctgaactgc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2185 aataggcaaaagatatagcaacctacctccgcaaaaaaaggaaaaaggtatctgaactgc 2244
Query: 900 tatttggaaatcaaaccttacatctgtttttacctgctatttttttttttttgggtgttt 959
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2245 tatttggaaatcaaaccttacatctgtttttacctgctattttttttttttttggtgttt 2304
Query: 960 gattttaccgtgcaamaagatccgattycagaaggaaaatcttgggtgaaggaaaatctg 1019
||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 2305 gattttaccgtgcaacaagatccgatt-cagaaggaaaatctt-ggtgaaggaaaatct- 2361
Query: 1020 gaaaatatcagacgggcaagtcctcattactgcactaaamaaacaaaaaat 1070
||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2362 gaaaatatcagacgggcaagtcctcattactgcactaaacaaacaaaaaat 2412
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 25,071
Number of Sequences: 1807
Number of extensions: 25071
Number of successful extensions: 323
Number of sequences better than 1.0e-20: 1
length of query: 1070
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1054
effective length of database: 10,329,639
effective search space: 10887439506
effective search space used: 10887439506
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)